Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812465.1_cds_XP_016497171.1_11323
CDS Infomation

[gene=LOC107816018] [db_xref=GeneID:107816018] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016497171.1] [location=complement(join(17867..18469,18552..18659,18732..18959,19846..20100,20666..20731))] [gbkey=CDS]
Sequence

ATGGGTGGTTCAGGGAAATGGATCAAATCATTAATCAGTTCAAAAAAGAACCAATCCAAT
GATCCTGAGAAGGGTGGTGTCAAGAGCAGAAAATGGAAGCTGTGGAGAAATGCATCTGGT
GGAATAGCTATGTCGTCGTCGAAAGGTGTAAAAGGTGGTGGCCATTTGGGAGATTCAGAG
GGGTCAGAGTCGTCGTTCATGTCTGACACTACTTTGGCTGCTGCTATGGCTACTGTGGTC
AGGGCTCCACACAAAGATTTTATTGTTGTGAAAAAAGAATGGGCTGCTATTCGAATTCAG
GCTGCGTTTCGGGGTTTTCTGGCAAGGCGTGCATTAAGGGCATTGAAAGCAGTGGTTAGG
CTACAAGCTATATTTCGTGGACGACAAGTGAGAAAGCAAGCTGCTATGACCCTCAAGTGC
ATGCAAGCTCTCGTTCGCGTTCAGGCCCGAATGAGAGCCCAATGCACTCAAACATCTCTT
GTAGGAGATGCAATGAAAGGATCTCTTGCTGATAACTCTAGCCAAGCTGACCCAATTAAG
CAAGCTGAGGGTGGATGGTGCGATAGCCCTGGCACAGTGGACGAAGTAAGGTCTAAGTTA
AAAATGAGACAAGTCGGCGCAATAAAAAGAGAAAGGGCCATTGCATATGCACAACAGAAA
CTGAGAACGAACCCAAGCCCGAATTCAAGAGTAAGAAAAGTGGAAACCTTAAATAAGATT
AAGGCTAACGGGGATTCAAATTGGTTAGAGCGTTGGATGGCGAATAAGCCTTGGGAAAGT
AGATTGGCTGACGAATTCCATACTGATGCATCGGGGATGACCCCAAGTTCTAGGAAGCAT
GAAGATTATGCGGTTGGATCGGAGCGAAGTTCAGTAAATATTAGACGAAACAACGTTTCT
ACCAGGATATCTACAAGAGGGCCAATGAGTTGTCAAATAGTCAATTCATCTTCTGAGCCT
TATTCGGAGTATTATCCGTATGATGATAGCACGTCGTCTTATTCATCCTTGTCAACTTCT
GAAGAAGGAAATAGCAAGAAGCCGAGTTACATGAATCTCACGAAGTCTATTAAGGCAAAG
GTTAAGCAGAGAAATACCAGCTATTTGTCTCAAAGTATGCAAAGGAATTCAACTGATAGC
TTACAATTCAATAGGAAATCAAGCCCACTTTCGAGGGTGATAGCGAGGAGAAGTGCAGAT
TGTGATCTTTATTCAGTTGATCTGTGTAAGGATCTCTACCCTCCCTCAAATGCATTCTGA

Peptide Sequence

PEP ID

XP_016497171.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MGGSGKWIKSLISSKKNQSNDPEKGGVKSRKWKLWRNASGGIAMSSSKGVKGGGHLGDSE
GSESSFMSDTTLAAAMATVVRAPHKDFIVVKKEWAAIRIQAAFRGFLARRALRALKAVVR
LQAIFRGRQVRKQAAMTLKCMQALVRVQARMRAQCTQTSLVGDAMKGSLADNSSQADPIK
QAEGGWCDSPGTVDEVRSKLKMRQVGAIKRERAIAYAQQKLRTNPSPNSRVRKVETLNKI
KANGDSNWLERWMANKPWESRLADEFHTDASGMTPSSRKHEDYAVGSERSSVNIRRNNVS
TRISTRGPMSCQIVNSSSEPYSEYYPYDDSTSSYSSLSTSEEGNSKKPSYMNLTKSIKAK
VKQRNTSYLSQSMQRNSTDSLQFNRKSSPLSRVIARRSADCDLYSVDLCKDLYPPSNAF

Transcript Sequence

Gene sequence data has not been registered.